Deep divergences of human gene trees and models of human origins.
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[1] F. Balloux,et al. Geography predicts neutral genetic diversity of human populations , 2005, Current Biology.
[2] N. Takahata,et al. Allelic genealogy and human evolution. , 1993, Molecular biology and evolution.
[3] Sohini Ramachandran,et al. Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[4] Kirk E Lohmueller,et al. Detecting ancient admixture and estimating demographic parameters in multiple human populations. , 2009, Molecular biology and evolution.
[5] O. François,et al. Approximate Bayesian Computation (ABC) in practice. , 2010, Trends in ecology & evolution.
[6] P. Donnelly,et al. The Fine-Scale Structure of Recombination Rate Variation in the Human Genome , 2004, Science.
[7] R. Griffiths,et al. Archaic African and Asian lineages in the genetic ancestry of modern humans. , 1997, American journal of human genetics.
[8] J. Wall. Estimating ancestral population sizes and divergence times. , 2003, Genetics.
[9] S. Tishkoff,et al. African genetic diversity: implications for human demographic history, modern human origins, and complex disease mapping. , 2008, Annual review of genomics and human genetics.
[10] M. Feldman,et al. Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation , 2008 .
[11] Anthropological Genetics: General Applications , 2006 .
[12] Ryan D. Hernandez,et al. Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data , 2009, PLoS genetics.
[13] Jean-Marie Hombert,et al. Origins and Genetic Diversity of Pygmy Hunter-Gatherers from Western Central Africa , 2009, Current Biology.
[14] August E. Woerner,et al. A novel DNA sequence database for analyzing human demographic history. , 2008, Genome research.
[15] Zachary A. Szpiech,et al. Genotype, haplotype and copy-number variation in worldwide human populations , 2008, Nature.
[16] R. Hudson. The Variance of Coalescent Time Estimates from DNA Sequences , 2007, Journal of Molecular Evolution.
[17] D. Balding,et al. Approximate Bayesian computation in population genetics. , 2002, Genetics.
[18] Michel Veuille,et al. Power of Neutrality Tests to Detect Bottlenecks and Hitchhiking , 2003, Journal of Molecular Evolution.
[19] M. Olivier. A haplotype map of the human genome. , 2003, Nature.
[20] G. McVean,et al. A structured ancestral population for the evolution of modern humans. , 2004, Current opinion in genetics & development.
[21] Guillaume Laval,et al. Formulating a Historical and Demographic Model of Recent Human Evolution Based on Resequencing Data from Noncoding Regions , 2010, PloS one.
[22] Fred L Bookstein,et al. Early modern human diversity suggests subdivided population structure and a complex out-of-Africa scenario , 2009, Proceedings of the National Academy of Sciences.
[23] S. Ambrose. Late Pleistocene human population bottlenecks, volcanic winter, and differentiation of modern humans. , 1998, Journal of human evolution.
[24] C. Schmegner,et al. Genetic variability in a genomic region with long-range linkage disequilibrium reveals traces of a bottleneck in the history of the European population , 2005, Human Genetics.
[25] Hie-Lim Kim,et al. Population Genetic Analysis of the N-Acylsphingosine Amidohydrolase Gene Associated With Mental Activity in Humans , 2008, Genetics.
[26] M. Feldman,et al. Frequentist estimation of coalescence times from nucleotide sequence data using a tree-based partition. , 2002, Genetics.
[27] A. Templeton,et al. Out of Africa again and again , 2002, Nature.
[28] M. Olivier. A haplotype map of the human genome , 2003, Nature.
[29] M. Hammer,et al. Deep Haplotype Divergence and Long-range Linkage Disequilibrium at Xp21.1 Provide Evidence That Humans Descend from a Structured Ancestral Population Porting the " Recent African Replacement " (rar) Model of Human Origins. the Rar Model Posits That Amh , 2022 .
[30] Vincent Plagnol,et al. Possible Ancestral Structure in Human Populations , 2006, PLoS genetics.
[31] Shuichi Matsumura,et al. Simulations, Genetics and Human Prehistory , 2008 .
[32] G. Coop,et al. High-Resolution Mapping of Crossovers Reveals Extensive Variation in Fine-Scale Recombination Patterns Among Humans , 2008, Science.
[33] R. Hudson,et al. Evidence that the adaptive allele of the brain size gene microcephalin introgressed into Homo sapiens from an archaic Homo lineage , 2006, Proceedings of the National Academy of Sciences.
[34] M. Jakobsson,et al. Explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa , 2009, Proceedings of the National Academy of Sciences.
[35] Mark A. Beaumont,et al. Joint determination of topology, divergence time, and immigration in population trees , 2008 .
[36] M. Stoneking,et al. Neandertal DNA Sequences and the Origin of Modern Humans , 1997, Cell.
[37] M W Feldman,et al. Recent common ancestry of human Y chromosomes: evidence from DNA sequence data. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[38] Carsten Wiuf,et al. Gene Genealogies, Variation and Evolution - A Primer in Coalescent Theory , 2004 .
[39] L. Excoffier,et al. Statistical evaluation of alternative models of human evolution , 2007, Proceedings of the National Academy of Sciences.
[40] G. Glazko,et al. Estimation of divergence times for major lineages of primate species. , 2003, Molecular biology and evolution.
[41] Richard R. Hudson,et al. Generating samples under a Wright-Fisher neutral model of genetic variation , 2002, Bioinform..
[42] Feng Chen,et al. Sequencing and Analysis of Neanderthal Genomic DNA , 2006, Science.
[43] T. Hayakawa,et al. Fixation of the Human-Specific CMP-N-Acetylneuraminic Acid Hydroxylase Pseudogene and Implications of Haplotype Diversity for Human Evolution , 2006, Genetics.
[44] M. Hammer,et al. Genetic evidence for unequal effective population sizes of human females and males. , 2004, Molecular biology and evolution.
[45] Deborah A Nickerson,et al. Population History and Natural Selection Shape Patterns of Genetic Variation in 132 Genes , 2004, PLoS biology.
[46] M. Hammer,et al. Testing for Archaic Hominin Admixture on the X Chromosome: Model Likelihoods for the Modern Human RRM2P4 Region From Summaries of Genealogical Topology Under the Structured Coalescent , 2008, Genetics.
[47] R. Hudson,et al. Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[48] C. Tyler-Smith,et al. A Worldwide Survey of Human Male Demographic History Based on Y-SNP and Y-STR Data from the HGDP–CEPH Populations , 2009, Molecular biology and evolution.
[49] J. Hey,et al. X chromosome evidence for ancient human histories. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[50] Noah A. Rosenberg,et al. Demographic History of European Populations of Arabidopsis thaliana , 2008, PLoS genetics.
[51] M. Kreitman,et al. Methods to detect selection in populations with applications to the human. , 2000, Annual review of genomics and human genetics.
[52] J. Wall,et al. Inconsistencies in Neanderthal Genomic DNA Sequences , 2007, PLoS genetics.
[53] J. Fleagle,et al. Stratigraphic placement and age of modern humans from Kibish, Ethiopia , 2005, Nature.
[54] M. Wolpoff,et al. Multiregional, not multiple origins. , 2000, American journal of physical anthropology.
[55] P. Mellars. Why did modern human populations disperse from Africa ca. 60,000 years ago? A new model. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[56] Olivier François,et al. Non-linear regression models for Approximate Bayesian Computation , 2008, Stat. Comput..
[57] Philip L. F. Johnson,et al. A Draft Sequence of the Neandertal Genome , 2010, Science.
[58] Michael F. Hammer,et al. Reconstructing human origins in the genomic era , 2006, Nature Reviews Genetics.
[59] A. Brix. Bayesian Data Analysis, 2nd edn , 2005 .
[60] M. Stoneking,et al. Mitochondrial DNA and human evolution , 1987, Nature.
[61] Chris Stringer,et al. Modern human origins: progress and prospects. , 2002, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[62] G. Coop,et al. The Timing of Selection at the Human FOXP2 Gene , 2008, Molecular biology and evolution.
[63] T. Yee. The VGAM Package for Categorical Data Analysis , 2010 .
[64] R. Foley,et al. Multiple dispersals and modern human origins , 2005 .
[65] David B. Dunson,et al. Bayesian Data Analysis , 2010 .
[66] T. White,et al. Pleistocene Homo sapiens from Middle Awash, Ethiopia , 2003, Nature.
[67] Pardis C Sabeti,et al. Deciphering the ancient and complex evolutionary history of human arylamine N-acetyltransferase genes. , 2006, American journal of human genetics.
[68] S. Gabriel,et al. Calibrating a coalescent simulation of human genome sequence variation. , 2005, Genome research.
[69] Gabor T. Marth,et al. The Allele Frequency Spectrum in Genome-Wide Human Variation Data Reveals Signals of Differential Demographic History in Three Large World Populations , 2004, Genetics.
[70] Chris Tyler-Smith,et al. The human Y chromosome: an evolutionary marker comes of age , 2003, Nature Reviews Genetics.
[71] S. Pääbo,et al. Mitochondrial genome variation and the origin of modern humans , 2000, Nature.
[72] J. Noonan,et al. Neanderthal genomics and the evolution of modern humans. , 2010, Genome research.
[73] G. Casella. An Introduction to Empirical Bayes Data Analysis , 1985 .