Compressive Sensing DNA Microarrays
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Richard G. Baraniuk | Olgica Milenkovic | Mona A. Sheikh | Wei Dai | Richard Baraniuk | Wei Dai | O. Milenkovic | M. A. Sheikh
[1] Richard G. Baraniuk,et al. Bayesian Compressive Sensing Via Belief Propagation , 2008, IEEE Transactions on Signal Processing.
[2] H. Blöcker,et al. Predicting DNA duplex stability from the base sequence. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[3] J. Townsend,et al. Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi , 2006, Philosophical Transactions of the Royal Society B: Biological Sciences.
[4] Michael Zuker,et al. Mfold web server for nucleic acid folding and hybridization prediction , 2003, Nucleic Acids Res..
[5] Piotr Indyk,et al. Sparse Recovery Using Sparse Random Matrices , 2010, LATIN.
[6] Jiasen Lu,et al. Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays. , 2000, Nucleic acids research.
[7] Marie-Claude Potier,et al. On-chip hybridization kinetics for optimization of gene expression experiments. , 2008, BioTechniques.
[8] Wei Zhang,et al. Data extraction from composite oligonucleotide microarrays. , 2003, Nucleic acids research.
[9] Emmanuel J. Candès,et al. Decoding by linear programming , 2005, IEEE Transactions on Information Theory.
[10] E. Candès,et al. Stable signal recovery from incomplete and inaccurate measurements , 2005, math/0503066.
[11] Richard Baraniuk,et al. DNA Array Decoding from Nonlinear Measurements by Belief Propagation , 2007, 2007 IEEE/SP 14th Workshop on Statistical Signal Processing.
[12] Alexander Schliep,et al. New, Improved, and Practical k-Stem Sequence Similarity Measures for Probe Design , 2008, J. Comput. Biol..
[13] R. Thewes,et al. A fully electronic DNA sensor with 128 positions and in-pixel A/D conversion , 2004, IEEE Journal of Solid-State Circuits.
[14] Douglas M. Hawkins,et al. A variance-stabilizing transformation for gene-expression microarray data , 2002, ISMB.
[15] Navin Kashyap,et al. DNA codes that avoid secondary structures , 2005, Proceedings. International Symposium on Information Theory, 2005. ISIT 2005..
[16] Olgica Milenkovic,et al. On graphical representations of algebraic codes suitable for iterative decoding , 2005, IEEE Communications Letters.
[17] Alexander Schliep,et al. Group testing with DNA chips: generating designs and decoding experiments , 2003, Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.
[18] Felix Naef,et al. Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays. , 2003, Nucleic acids research.
[19] D. Du,et al. Combinatorial Group Testing and Its Applications , 1993 .
[20] Ronald A. DeVore,et al. Deterministic constructions of compressed sensing matrices , 2007, J. Complex..
[21] F. Huang,et al. Efficient incorporation of CoA, NAD and FAD into RNA by in vitro transcription. , 2003, Nucleic acids research.
[22] D. Galbraith,et al. Microarray-based analysis of gene expression in very large gene families: the cytochrome P450 gene superfamily of Arabidopsis thaliana. , 2001, Gene.
[23] Richard Baraniuk,et al. Compressed Sensing Reconstruction via Belief Propagation , 2006 .
[24] Joel A. Tropp,et al. Greed is good: algorithmic results for sparse approximation , 2004, IEEE Transactions on Information Theory.
[25] M S Waterman,et al. Identification of common molecular subsequences. , 1981, Journal of molecular biology.
[26] T. Ryan Gregory,et al. Macroevolution, hierarchy theory, and the C-value enigma , 2004, Paleobiology.
[27] James M. Eldred,et al. Viral Discovery and Sequence Recovery Using DNA Microarrays , 2003, PLoS biology.
[28] Jonas S. Almeida,et al. A multivariate prediction model for microarray cross-hybridization , 2006, BMC Bioinformatics.
[29] Olgica Milenkovic,et al. Subspace Pursuit for Compressive Sensing: Closing the Gap Between Performance and Complexity , 2008, ArXiv.