An approximate internal model principle: Applications to nonlinear models of biological systems

Abstract The proper function of many biological systems requires that external perturbations be detected, allowing the system to adapt to these environmental changes. It is now well established that this dual detection and adaptation requires that the system has an internal model in the feedback loop. In this paper we relax the requirement that the response of the system adapts perfectly, but instead allow regulation to within a neighborhood of zero. We show, in a nonlinear setting, that systems with the ability to detect input signals and approximately adapt require an approximate model of the input. We illustrate our results by analyzing a well-studied biological system. These results generalize previous work which treats the perfectly adapting case.

[1]  U. Alon,et al.  Robustness in bacterial chemotaxis , 2022 .

[2]  Jan C. Willems,et al.  Almost disturbance decoupling with internal stability , 1989 .

[3]  Liu Yang,et al.  Positive feedback may cause the biphasic response observed in the chemoattractant-induced response of Dictyostelium cells , 2006, Syst. Control. Lett..

[4]  H. Berg,et al.  Adaptation kinetics in bacterial chemotaxis , 1983, Journal of bacteriology.

[5]  M. Khammash,et al.  Calcium homeostasis and parturient hypocalcemia: an integral feedback perspective. , 2002, Journal of theoretical biology.

[6]  Sharad Bhartiya,et al.  Multiple feedback loops are key to a robust dynamic performance of tryptophan regulation in Escherichia coli , 2004, FEBS letters.

[7]  Paul Miller,et al.  Inhibitory control by an integral feedback signal in prefrontal cortex: a model of discrimination between sequential stimuli. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[8]  Wilson J. Rugh,et al.  Output regulation with derivative information , 1995, IEEE Trans. Autom. Control..

[9]  D. Koshland,et al.  Amplification and adaptation in regulatory and sensory systems. , 1982, Science.

[10]  Tzyh Jong Tarn,et al.  Semiglobal L2 performance bounds for disturbance attenuation in nonlinear systems , 1999, IEEE Trans. Autom. Control..

[11]  E.D. Sontag,et al.  Signal Detection and Approximate Adaptation Implies an Approximate Internal Model , 2006, Proceedings of the 45th IEEE Conference on Decision and Control.

[12]  Walter Murray Wonham,et al.  Structurally stable nonlinear regulation with step inputs , 1984, Mathematical systems theory.

[13]  W. M. Wonham,et al.  The Semistable-Center-Unstable Manifold near a Critical Element* , 1984 .

[14]  Eduardo D. Sontag,et al.  Adaptation and regulation with signal detection implies internal model , 2003, Syst. Control. Lett..

[15]  W. Wonham,et al.  The internal model principle for linear multivariable regulators , 1975 .

[16]  D. Lauffenburger Cell signaling pathways as control modules: complexity for simplicity? , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[17]  A. Isidori,et al.  Output regulation of nonlinear systems , 1990 .

[18]  Eduardo Sontag Input to State Stability: Basic Concepts and Results , 2008 .

[19]  Uri Alon,et al.  An Introduction to Systems Biology , 2006 .

[20]  S. Leibler,et al.  Robustness in simple biochemical networks , 1997, Nature.

[21]  A. Isidori Nonlinear Control Systems , 1985 .

[22]  W. Wonham,et al.  Error feedback and internal models on differentiable manifolds , 1982, 1982 21st IEEE Conference on Decision and Control.

[23]  Pablo A. Iglesias,et al.  A general framework for achieving integral control in chemotactic biological signaling mechanisms , 2001, Proceedings of the 40th IEEE Conference on Decision and Control (Cat. No.01CH37228).

[24]  J. Doyle,et al.  Robust perfect adaptation in bacterial chemotaxis through integral feedback control. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[25]  Pablo A. Iglesias Input-output stability of sampled-data linear time-varying systems , 1995 .