Dendritic trafficking faces physiologically critical speed-precision tradeoffs
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[1] Takashi Kawashima,et al. Inverse Synaptic Tagging of Inactive Synapses via Dynamic Interaction of Arc/Arg3.1 with CaMKIIβ , 2012, Cell.
[2] K. Martin,et al. Synapse-to-nucleus signaling , 2011, Current Opinion in Neurobiology.
[3] J. Morrison,et al. Activity-regulated cytoskeletal-associated protein is localized to recently activated excitatory synapses , 2004, Neuroscience.
[4] Martin Korte,et al. Form follows function: BDNF and its involvement in sculpting the function and structure of synapses , 2014, Neuropharmacology.
[5] Michael D. Kim,et al. Mechanisms that regulate establishment, maintenance, and remodeling of dendritic fields. , 2007, Annual review of neuroscience.
[6] R. Wong,et al. Activity-dependent regulation of dendritic growth and patterning , 2002, Nature Reviews Neuroscience.
[7] O. Steward,et al. Selective Targeting of Newly Synthesized Arc mRNA to Active Synapses Requires NMDA Receptor Activation , 2001, Neuron.
[8] Robert H. Singer,et al. In the right place at the right time: visualizing and understanding mRNA localization , 2014, Nature Reviews Molecular Cell Biology.
[9] E. Kandel. The Molecular Biology of Memory Storage: A Dialogue Between Genes and Synapses , 2001, Science.
[10] Eric Jones,et al. SciPy: Open Source Scientific Tools for Python , 2001 .
[11] Melanie Laßek,et al. The synaptic proteome , 2014, Cell and Tissue Research.
[12] S. Heinemann,et al. Distal Dendritic Inputs Control Neuronal Activity by Heterosynaptic Potentiation of Proximal Inputs , 2013, The Journal of Neuroscience.
[13] M. Welte,et al. Bidirectional Transport along Microtubules , 2004, Current Biology.
[14] Oswald Steward,et al. Selective Localization of Arc mRNA in Dendrites Involves Activity- and Translation-Dependent mRNA Degradation , 2014, The Journal of Neuroscience.
[15] Karl Deisseroth,et al. Signaling from synapse to nucleus: the logic behind the mechanisms , 2003, Current Opinion in Neurobiology.
[16] Michael L. Hines,et al. Neuroinformatics Original Research Article Neuron and Python , 2022 .
[17] H. Bading,et al. Transcription-dependent neuronal plasticity: The nuclear calcium hypothesis. , 2000, European journal of biochemistry.
[18] Xinnan Wang,et al. The Mechanism of Ca2+-Dependent Regulation of Kinesin-Mediated Mitochondrial Motility , 2009, Cell.
[19] Anders Lansner,et al. Computing the Local Field Potential (LFP) from Integrate-and-Fire Network Models , 2015, PLoS Comput. Biol..
[20] Oswald Steward,et al. Dynamics of bidirectional transport of Arc mRNA in neuronal dendrites , 2007, The Journal of comparative neurology.
[21] Simon L. Bullock,et al. Single-molecule assays reveal that RNA localization signals regulate dynein-dynactin copy number on individual transcript cargoes , 2012, Nature Cell Biology.
[22] Michael E. Greenberg,et al. From Synapse to Nucleus: Calcium-Dependent Gene Transcription in the Control of Synapse Development and Function , 2008, Neuron.
[23] Melanie J. I. Müller,et al. Tug-of-war as a cooperative mechanism for bidirectional cargo transport by molecular motors , 2008, Proceedings of the National Academy of Sciences.
[24] Yosuke Tanaka,et al. Molecular Motors in Neurons: Transport Mechanisms and Roles in Brain Function, Development, and Disease , 2010, Neuron.
[25] Berton A. Earnshaw,et al. Diffusion-trapping model of receptor trafficking in dendrites. , 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.
[26] Kelsey C. Martin,et al. Synapse Formation and mRNA Localization in Cultured Aplysia Neurons , 2006, Neuron.
[27] Alan R. Mardinly,et al. Npas4 Regulates Excitatory-Inhibitory Balance within Neural Circuits through Cell-Type-Specific Gene Programs , 2014, Cell.
[28] Bin Wu,et al. Translation dynamics of single mRNAs in live cells and neurons , 2016, Science.
[29] K. Martin,et al. Neuron-wide RNA transport combines with netrin-mediated local translation to spatially regulate the synaptic proteome , 2015, eLife.
[30] Upinder Singh Bhalla,et al. Trafficking motifs as the basis for two-compartment signaling systems to form multiple stable states. , 2011, Biophysical journal.
[31] Hye Yoon Park,et al. Visualization of Dynamics of Single Endogenous mRNA Labeled in Live Mouse , 2014, Science.
[32] Ge Yang,et al. A simple photoactivation and image analysis module for visualizing and analyzing axonal transport with high temporal resolution , 2011, Nature Protocols.
[33] Paul C Bressloff,et al. Stochastic model of protein receptor trafficking prior to synaptogenesis. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[34] Vicenç Méndez,et al. Non-Markovian model for transport and reactions of particles in spiny dendrites. , 2008, Physical review letters.
[35] R. Lipowsky,et al. Cooperative cargo transport by several molecular motors. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[36] U. Bhalla. Molecular computation in neurons: a modeling perspective , 2014, Current Opinion in Neurobiology.
[37] Oswald Steward,et al. Synaptic Activation Causes the mRNA for the IEG Arc to Localize Selectively near Activated Postsynaptic Sites on Dendrites , 1998, Neuron.
[38] C. Holt,et al. The Central Dogma Decentralized: New Perspectives on RNA Function and Local Translation in Neurons , 2013, Neuron.
[39] Sathyanarayanan V. Puthanveettil,et al. New approach to capture and characterize synaptic proteome , 2014, Proceedings of the National Academy of Sciences.
[40] Paul C. Bressloff,et al. Directed intermittent search for hidden targets , 2009 .
[41] M. Greenberg,et al. The activity-dependent transcription factor NPAS4 regulates domain-specific inhibition , 2013, Nature.
[42] J. Magee. Dendritic Hyperpolarization-Activated Currents Modify the Integrative Properties of Hippocampal CA1 Pyramidal Neurons , 1998, The Journal of Neuroscience.
[43] Subhojit Roy,et al. Early and Selective Impairments in Axonal Transport Kinetics of Synaptic Cargoes Induced by Soluble Amyloid β‐Protein Oligomers , 2012, Traffic.
[44] Mikyoung Park,et al. Recycling Endosomes Supply AMPA Receptors for LTP , 2004, Science.
[45] A. Caspi,et al. Enhanced diffusion in active intracellular transport. , 2000, Physical review letters.
[46] E. Schuman,et al. Dendritic Protein Synthesis, Synaptic Plasticity, and Memory , 2006, Cell.
[47] Mu-ming Poo,et al. Neurotrophin regulation of neural circuit development and function , 2012, Nature Reviews Neuroscience.
[48] Sergej L Mironov,et al. ADP regulates movements of mitochondria in neurons. , 2007, Biophysical journal.
[49] Nobutaka Hirokawa,et al. Kinesin Transports RNA Isolation and Characterization of an RNA-Transporting Granule , 2004, Neuron.
[50] M. Hines,et al. Efficient computation of branched nerve equations. , 1984, International journal of bio-medical computing.
[51] Bin Wu,et al. Single β-Actin mRNA Detection in Neurons Reveals a Mechanism for Regulating Its Translatability , 2014, Science.
[52] James A. Gagnon,et al. Molecular motors: directing traffic during RNA localization , 2011, Critical reviews in biochemistry and molecular biology.
[53] R. Simmons,et al. Models of motor-assisted transport of intracellular particles. , 2001, Biophysical journal.
[54] B. Grant,et al. Pathways and mechanisms of endocytic recycling , 2009, Nature Reviews Molecular Cell Biology.
[55] R. Morris,et al. Making memories last: the synaptic tagging and capture hypothesis , 2010, Nature Reviews Neuroscience.
[56] John M. Walker,et al. Molecular Motors , 2007, Methods in Molecular Biology™.
[57] M. Kiebler,et al. Mechanisms of dendritic mRNA transport and its role in synaptic tagging , 2011, The EMBO journal.
[58] Robert H. Singer,et al. In the right place at the right time: visualizing and understanding mRNA localization , 2015, Nature Reviews Molecular Cell Biology.
[59] L. Goldstein,et al. Bead movement by single kinesin molecules studied with optical tweezers , 1990, Nature.
[60] Vladimir Gelfand,et al. Myosin cooperates with microtubule motors during organelle transport in melanophores , 1998, Current Biology.
[61] J. Montgomery,et al. Synaptic activity regulates AMPA receptor trafficking through different recycling pathways , 2015, eLife.
[62] Erin M. Schuman,et al. The Local Transcriptome in the Synaptic Neuropil Revealed by Deep Sequencing and High-Resolution Imaging , 2012, Neuron.
[63] Michele Migliore,et al. Know Your Current Ih: Interaction with a Shunting Current Explains the Puzzling Effects of Its Pharmacological or Pathological Modulations , 2012, PloS one.
[64] Erin M. Schuman,et al. Dynamic Visualization of Local Protein Synthesis in Hippocampal Neurons , 2001, Neuron.
[65] G. Ascoli,et al. NeuroMorpho.Org: A Central Resource for Neuronal Morphologies , 2007, The Journal of Neuroscience.
[66] Eberhard O. Voit,et al. 150 Years of the Mass Action Law , 2015, PLoS Comput. Biol..
[67] James P. Keener,et al. Mathematical physiology , 1998 .
[68] P. Bressloff,et al. Quasi-steady State Reduction of Molecular Motor-Based Models of Directed Intermittent Search , 2010, Bulletin of mathematical biology.
[69] Kenneth S Kosik,et al. Neuronal RNA Granules A Link between RNA Localization and Stimulation-Dependent Translation , 2001, Neuron.
[70] C. Vickers,et al. Induction and maintenance of late‐phase long‐term potentiation in isolated dendrites of rat hippocampal CA1 pyramidal neurones , 2005, The Journal of physiology.
[71] D. Dombeck,et al. Polarized microtubule arrays in apical dendrites and axons , 2008, Proceedings of the National Academy of Sciences.
[72] Steven W. Flavell,et al. Signaling mechanisms linking neuronal activity to gene expression and plasticity of the nervous system. , 2008, Annual review of neuroscience.
[73] I. Weiler,et al. Altered mRNA transport, docking, and protein translation in neurons lacking fragile X mental retardation protein , 2010, Proceedings of the National Academy of Sciences.
[74] William O. Hancock,et al. Bidirectional cargo transport: moving beyond tug of war , 2014, Nature Reviews Molecular Cell Biology.
[75] P. Bressloff,et al. Stochastic models of intracellular transport , 2013 .
[76] E. Kandel,et al. Requirement of a critical period of transcription for induction of a late phase of LTP. , 1994, Science.
[77] E. Peterman,et al. Novel ways to determine kinesin-1's run length and randomness using fluorescence microscopy. , 2009, Biophysical journal.
[78] Robert H Singer,et al. Single-molecule insights into mRNA dynamics in neurons. , 2015, Trends in cell biology.
[79] Paul C Bressloff,et al. Local synaptic signaling enhances the stochastic transport of motor-driven cargo in neurons , 2010 .
[80] U. Frey,et al. Synaptic tagging and long-term potentiation , 1997, Nature.
[81] E. Schuman,et al. A Requirement for Local Protein Synthesis in Neurotrophin-Induced Hippocampal Synaptic Plasticity , 1996, Science.
[82] U. Frey,et al. Weak before strong: dissociating synaptic tagging and plasticity-factor accounts of late-LTP , 1998, Neuropharmacology.
[83] D. Johnston,et al. K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons , 1997, Nature.
[84] Kristen M. Harris,et al. Plasticity-Induced Growth of Dendritic Spines by Exocytic Trafficking from Recycling Endosomes , 2006, Neuron.
[85] Harish Chandra Soundararajan,et al. The influence of dynein processivity control, MAPs, and microtubule ends on directional movement of a localising mRNA , 2014, eLife.
[86] Eric R. Kandel,et al. A New Component in Synaptic Plasticity: Upregulation of Kinesin in the Neurons of the Gill-Withdrawal Reflex , 2008, Cell.
[87] C. Gardiner. Stochastic Methods: A Handbook for the Natural and Social Sciences , 2009 .