A parameter-adaptive dynamic programming approach for inferring cophylogenies
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Daniel Merkle | Martin Middendorf | Nicolas Wieseke | M. Middendorf | D. Merkle | Nicolas Wieseke | Daniel Merkle
[1] John A. Nelder,et al. A Simplex Method for Function Minimization , 1965, Comput. J..
[2] Roderic D. M. Page,et al. Tangled trees : phylogeny, cospeciation, and coevolution , 2003 .
[3] U Aickelin,et al. Handbook of metaheuristics (International series in operations research and management science) , 2005 .
[4] Tatiana Giraud,et al. Cophylogeny of the anther smut fungi and their caryophyllaceous hosts: Prevalence of host shifts and importance of delimiting parasite species for inferring cospeciation , 2008, BMC Evolutionary Biology.
[5] Ran Libeskind-Hadas,et al. On the Computational Complexity of the Reticulate Cophylogeny Reconstruction Problem , 2009, J. Comput. Biol..
[6] Fredrik Ronquist,et al. Parsimony analysis of coevolving species associa-tions , 2002 .
[7] D. Aldous. Stochastic models and descriptive statistics for phylogenetic trees, from Yule to today , 2001 .
[8] Daniel Merkle,et al. Reconstruction of the cophylogenetic history of related phylogenetic trees with divergence timing information , 2005, Theory in Biosciences.
[9] Russell D. Gray,et al. Drowning on arrival, missing the boat, and x-events: how likely are sorting events? , 2003 .
[10] Kevin P. Johnson,et al. Multiple cophylogenetic analyses reveal frequent cospeciation between pelecaniform birds and Pectinopygus lice. , 2007, Systematic biology.
[11] Michael A. Charleston,et al. Traversing the tangle: Algorithms and applications for cophylogenetic studies , 2006, J. Biomed. Informatics.
[12] M. Charleston,et al. Jungles: a new solution to the host/parasite phylogeny reconciliation problem. , 1998, Mathematical biosciences.
[13] M. Siddall,et al. Computer‐Intensive Randomization in Systematics , 2001 .
[14] F. Glover,et al. Handbook of Metaheuristics , 2019, International Series in Operations Research & Management Science.
[15] F. Hoffmann,et al. Tangled Trees: Phylogeny, Cospeciation, and Coevolution , 2004 .
[16] G. Spicer,et al. Associations between mycophagous Drosophila and their Howardula nematode parasites: a worldwide phylogenetic shuffle , 2002, Molecular ecology.