A closed-loop compressive-sensing-based neural recording system

OBJECTIVE This paper describes a low power closed-loop compressive sensing (CS) based neural recording system. This system provides an efficient method to reduce data transmission bandwidth for implantable neural recording devices. By doing so, this technique reduces a majority of system power consumption which is dissipated at data readout interface. The design of the system is scalable and is a viable option for large scale integration of electrodes or recording sites onto a single device. APPROACH The entire system consists of an application-specific integrated circuit (ASIC) with 4 recording readout channels with CS circuits, a real time off-chip CS recovery block and a recovery quality evaluation block that provides a closed feedback to adaptively adjust compression rate. Since CS performance is strongly signal dependent, the ASIC has been tested in vivo and with standard public neural databases. MAIN RESULTS Implemented using efficient digital circuit, this system is able to achieve >10 times data compression on the entire neural spike band (500-6KHz) while consuming only 0.83uW (0.53 V voltage supply) additional digital power per electrode. When only the spikes are desired, the system is able to further compress the detected spikes by around 16 times. Unlike other similar systems, the characteristic spikes and inter-spike data can both be recovered which guarantes a >95% spike classification success rate. The compression circuit occupied 0.11mm(2)/electrode in a 180nm CMOS process. The complete signal processing circuit consumes <16uW/electrode. SIGNIFICANCE Power and area efficiency demonstrated by the system make it an ideal candidate for integration into large recording arrays containing thousands of electrode. Closed-loop recording and reconstruction performance evaluation further improves the robustness of the compression method, thus making the system more practical for long term recording.

[1]  Prof. Dr. Valentino Braitenberg,et al.  Anatomy of the Cortex , 1991, Studies of Brain Function.

[2]  Maurits Ortmanns,et al.  Evaluation study of compressed sensing for neural spike recordings , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[3]  R. Quian Quiroga,et al.  Unsupervised Spike Detection and Sorting with Wavelets and Superparamagnetic Clustering , 2004, Neural Computation.

[4]  M. Elad,et al.  $rm K$-SVD: An Algorithm for Designing Overcomplete Dictionaries for Sparse Representation , 2006, IEEE Transactions on Signal Processing.

[5]  Volkan Cevher,et al.  Model-Based Compressive Sensing , 2008, IEEE Transactions on Information Theory.

[6]  Karim Abdelhalim,et al.  The 128-Channel Fully Differential Digital Integrated Neural Recording and Stimulation Interface , 2010, IEEE Transactions on Biomedical Circuits and Systems.

[7]  Pierre Vandergheynst,et al.  Compressed Sensing for Real-Time Energy-Efficient ECG Compression on Wireless Body Sensor Nodes , 2011, IEEE Transactions on Biomedical Engineering.

[8]  Awais M. Kamboh,et al.  Analysis of Lifting and B-Spline DWT Implementations for Implantable Neuroprosthetics , 2008, J. Signal Process. Syst..

[9]  Kjersti Engan,et al.  Multi-frame compression: theory and design , 2000, Signal Process..

[10]  Michael Elad,et al.  Optimized Projections for Compressed Sensing , 2007, IEEE Transactions on Signal Processing.

[11]  Trac D. Tran,et al.  Structured Dictionary Learning for Classification , 2014, ArXiv.

[12]  D. Hubel,et al.  Receptive fields of single neurones in the cat's striate cortex , 1959, The Journal of physiology.

[13]  Terrence J. Sejnowski,et al.  Learning Overcomplete Representations , 2000, Neural Computation.

[14]  Kip A Ludwig,et al.  Using a common average reference to improve cortical neuron recordings from microelectrode arrays. , 2009, Journal of neurophysiology.

[15]  Emmanuel J. Candès,et al.  Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information , 2004, IEEE Transactions on Information Theory.

[16]  Refet Firat Yazicioglu,et al.  24 Channel dual-band wireless neural recorder with activity-dependent power consumption , 2013, Analog Integrated Circuits and Signal Processing.

[17]  Itzhak Fried,et al.  Sleep States Differentiate Single Neuron Activity Recorded from Human Epileptic Hippocampus, Entorhinal Cortex, and Subiculum , 2002, The Journal of Neuroscience.

[18]  T. M. Mayhew,et al.  Anatomy of the Cortex: Statistics and Geometry. , 1991 .

[19]  Moo Sung Chae,et al.  A 128-Channel 6mW Wireless Neural Recording IC with On-the-Fly Spike Sorting and UWB Tansmitter , 2008, 2008 IEEE International Solid-State Circuits Conference - Digest of Technical Papers.

[20]  Awais M. Kamboh,et al.  A Scalable Wavelet Transform VLSI Architecture for Real-Time Signal Processing in High-Density Intra-Cortical Implants , 2007, IEEE Transactions on Circuits and Systems I: Regular Papers.

[21]  J. Csicsvari,et al.  Intracellular features predicted by extracellular recordings in the hippocampus in vivo. , 2000, Journal of neurophysiology.

[22]  Joel A. Tropp,et al.  Signal Recovery From Random Measurements Via Orthogonal Matching Pursuit , 2007, IEEE Transactions on Information Theory.

[23]  Ralph Etienne-Cummings,et al.  Energy-efficient two-stage Compressed Sensing method for implantable neural recordings , 2013, 2013 IEEE Biomedical Circuits and Systems Conference (BioCAS).

[24]  Daibashish Gangopadhyay,et al.  Compressed Sensing Analog Front-End for Bio-Sensor Applications , 2014, IEEE Journal of Solid-State Circuits.

[25]  A. Bruckstein,et al.  K-SVD : An Algorithm for Designing of Overcomplete Dictionaries for Sparse Representation , 2005 .

[26]  Awais M. Kamboh,et al.  Resource constrained VLSI architecture for implantable neural data compression systems , 2009, 2009 IEEE International Symposium on Circuits and Systems.

[27]  M. Sawan,et al.  An Ultra Low-Power CMOS Automatic Action Potential Detector , 2009, IEEE Transactions on Neural Systems and Rehabilitation Engineering.

[28]  Mani B. Srivastava,et al.  CapMux: A scalable analog front end for low power compressed sensing , 2012, 2012 International Green Computing Conference (IGCC).

[29]  Refet Firat Yazicioglu,et al.  An Efficient and Compact Compressed Sensing Microsystem for Implantable Neural Recordings , 2014, IEEE Transactions on Biomedical Circuits and Systems.

[30]  David L Donoho,et al.  Compressed sensing , 2006, IEEE Transactions on Information Theory.

[31]  Refet Firat Yazicioglu,et al.  An implantable 455-active-electrode 52-channel CMOS neural probe , 2013, 2013 IEEE International Solid-State Circuits Conference Digest of Technical Papers.

[32]  R. Genov,et al.  256-Channel Neural Recording and Delta Compression Microsystem With 3D Electrodes , 2009, IEEE Journal of Solid-State Circuits.

[33]  Karim Abdelhalim,et al.  64-Channel UWB Wireless Neural Vector Analyzer SOC With a Closed-Loop Phase Synchrony-Triggered Neurostimulator , 2013, IEEE Journal of Solid-State Circuits.

[34]  Teresa H. Y. Meng,et al.  HermesE: A 96-Channel Full Data Rate Direct Neural Interface in 0.13 $\mu$ m CMOS , 2012, IEEE Journal of Solid-State Circuits.

[35]  Deanna Needell,et al.  CoSaMP: Iterative signal recovery from incomplete and inaccurate samples , 2008, ArXiv.

[36]  Daibashish Gangopadhyay,et al.  Compressed Sensing System Considerations for ECG and EMG Wireless Biosensors , 2012, IEEE Transactions on Biomedical Circuits and Systems.

[37]  Mohamad Sawan,et al.  A Mixed-Signal Multichip Neural Recording Interface With Bandwidth Reduction , 2009, IEEE Transactions on Biomedical Circuits and Systems.

[38]  Mani B. Srivastava,et al.  Compressive Sensing of Neural Action Potentials Using a Learned Union of Supports , 2011, 2011 International Conference on Body Sensor Networks.

[39]  Guillermo Sapiro,et al.  Learning to Sense Sparse Signals: Simultaneous Sensing Matrix and Sparsifying Dictionary Optimization , 2009, IEEE Transactions on Image Processing.

[40]  Florian Solzbacher,et al.  Preliminary Study of the Thermal Impact of a Microelectrode Array Implanted in the Brain , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.