Collaborative analysis of multi-gigapixel imaging data using Cytomine
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Gilles Louppe | Raphaël Marée | Pierre Geurts | Louis Wehenkel | Benjamin Stevens | Renaud Hoyoux | Jean-Michel Begon | Philipp Kainz | Remy Vandaele | Loic Rollus | Gilles Louppe | P. Geurts | L. Wehenkel | R. Marée | Philipp Kainz | Rémy Vandaele | Jean-Michel Begon | Loïc Rollus | Benjamin Stevens | Renaud Hoyoux
[1] Ambuj K. Singh,et al. Bisque: a platform for bioimage analysis and management , 2009, Bioinform..
[2] Raphaël Marée,et al. Extremely Randomized Trees and Random Subwindows for Image Classification, Annotation, and Retrieval , 2013 .
[3] Raphaël Marée,et al. Automated processing of zebrafish imaging data: a survey. , 2013, Zebrafish.
[4] Krzysztof J. Gorgolewski,et al. Making big data open: data sharing in neuroimaging , 2014, Nature Neuroscience.
[5] Gilles Louppe,et al. A hybrid human-computer approach for large-scale image-based measurements using web services and machine learning , 2014, 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI).
[6] Daniel Choquet,et al. The data deluge , 2012, Nature Cell Biology.
[7] Edwin Cuppen,et al. Toward effective software solutions for big biology , 2015, Nature Biotechnology.
[8] Anne E Carpenter,et al. CellProfiler: image analysis software for identifying and quantifying cell phenotypes , 2006, Genome Biology.
[9] Xavier Draye,et al. An online database for plant image analysis software tools , 2013, Plant Methods.
[10] Gene Myers,et al. Why bioimage informatics matters , 2012, Nature Methods.
[11] Tobias Pietzsch,et al. BigDataViewer: visualization and processing for large image data sets , 2015, Nature Methods.
[12] Eric Lenaerts,et al. The timing of surgery after neoadjuvant radiotherapy influences tumor dissemination in a preclinical model , 2015, Oncotarget.
[13] Casey M. Schneider-Mizell,et al. Quantitative neuroanatomy for connectomics in Drosophila , 2015, bioRxiv.
[14] Ground-truth data cannot do it alone , 2011, Nature Methods.
[15] Stephan Saalfeld,et al. CATMAID: collaborative annotation toolkit for massive amounts of image data , 2009, Bioinform..
[16] Alan Moody. Perspective: The big picture , 2013, Nature.
[17] Stephan Saalfeld,et al. Quantitative neuroanatomy for connectomics in Drosophila , 2015 .
[18] Philippe Delvenne,et al. Evaluation of CellSolutions BestPrep® Automated Thin-Layer Liquid-Based Cytology Papanicolaou Slide Preparation and BestCyte® Cell Sorter Imaging System , 2014, Acta Cytologica.
[19] Mark Kriegsmann,et al. A laser microdissection-based workflow for FFPE tissue microproteomics: Important considerations for small sample processing. , 2016, Methods.
[20] Ullrich Köthe,et al. Ilastik: Interactive learning and segmentation toolkit , 2011, 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[21] Pascal de Tullio,et al. Activation of the calcium-sensing receptor before renal ischemia/reperfusion exacerbates kidney injury. , 2015, American journal of translational research.
[22] Jean-Christophe Olivo-Marin,et al. An approach for detection of glomeruli in multisite digital pathology , 2016, 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI).
[23] Software with impact , 2014, Nature Methods.
[24] Chengwen Chu,et al. Evaluation and Comparison of Anatomical Landmark Detection Methods for Cephalometric X-Ray Images: A Grand Challenge , 2015, IEEE Transactions on Medical Imaging.
[25] Robert F Murphy,et al. An active role for machine learning in drug development. , 2011, Nature chemical biology.
[26] Raphaël Marée,et al. Evaluation of BRCA1-related molecular features and microRNAs as prognostic factors for triple negative breast cancers , 2015, BMC Cancer.
[27] Erika Pastrana. Light-based electrophysiology , 2011, Nature Methods.
[28] Florian Jug,et al. Bioimage Informatics in the context of Drosophila research. , 2014, Methods.
[29] Nicolas Chenouard,et al. Icy: an open bioimage informatics platform for extended reproducible research , 2012, Nature Methods.
[30] D. Clery. Galaxy evolution. Galaxy zoo volunteers share pain and glory of research. , 2011, Science.
[31] B. Burmahl. The big picture. , 2000, Health facilities management.
[32] Louis Wehenkel,et al. Zebrafish Bone and General Physiology Are Differently Affected by Hormones or Changes in Gravity , 2015, PloS one.
[33] Raphaël Marée,et al. A rich internet application for remote visualization and collaborative annotation of digital slides in histology and cytology , 2013, Diagnostic Pathology.
[34] A. Bevan. The data deluge , 2015, Antiquity.
[35] Anne E Carpenter,et al. A call for bioimaging software usability , 2012, Nature Methods.
[36] Vivien Marx. The author file: Erik Meijering , 2014, Nature Methods.
[37] Raphaël Marée,et al. Phenotype Classification of Zebrafish Embryos by Supervised Learning , 2012, PloS one.
[38] Natalie de Souza. Machines learn phenotypes , 2012, Nature Methods.
[39] Jean-Michel Foidart,et al. Soluble factors regulated by epithelial–mesenchymal transition mediate tumour angiogenesis and myeloid cell recruitment , 2015, The Journal of pathology.
[40] Johannes E. Schindelin,et al. Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.