Using Deep Learning Algorithms to Grade Hydronephrosis Severity: Toward a Clinical Adjunct

Grading hydronephrosis severity relies on subjective interpretation of renal ultrasound images. Deep learning is a data-driven algorithmic approach to classifying data, including images, presenting a promising option for grading hydronephrosis. The current study explored the potential of deep convolutional neural networks (CNN), a type of deep learning algorithm, to grade hydronephrosis ultrasound images according to the 5-point Society for Fetal Urology (SFU) classification system, and discusses its potential applications in developing decision and teaching aids for clinical practice. We developed a five-layer CNN to grade 2,420 sagittal hydronephrosis ultrasound images [191 SFU 0 (8%), 407 SFU I (17%), 666 SFU II (28%), 833 SFU III (34%), and 323 SFU IV (13%)], from 673 patients ranging from 0 to 116.29 months old (Mage = 16.53, SD = 17.80). Five-way (all grades) and two-way classification problems [i.e., II vs. III, and low (0–II) vs. high (III–IV)] were explored. The CNN classified 94% (95% CI, 93–95%) of the images correctly or within one grade of the provided label in the five-way classification problem. Fifty-one percent of these images (95% CI, 49–53%) were correctly predicted, with an average weighted F1 score of 0.49 (95% CI, 0.47–0.51). The CNN achieved an average accuracy of 78% (95% CI, 75–82%) with an average weighted F1 of 0.78 (95% CI, 0.74–0.82) when classifying low vs. high grades, and an average accuracy of 71% (95% CI, 68–74%) with an average weighted F1 score of 0.71 (95% CI, 0.68–0.75) when discriminating between grades II vs. III. Our model performs well above chance level, and classifies almost all images either correctly or within one grade of the provided label. We have demonstrated the applicability of a CNN approach to hydronephrosis ultrasound image classification. Further investigation into a deep learning-based clinical adjunct for hydronephrosis is warranted.

[1]  Qinmu Peng,et al.  Multi-instance Deep Learning with Graph Convolutional Neural Networks for Diagnosis of Kidney Diseases Using Ultrasound Imaging , 2019, UNSURE/CLIP@MICCAI.

[2]  Yoshua Bengio,et al.  Gradient-based learning applied to document recognition , 1998, Proc. IEEE.

[3]  Alexander Binder,et al.  On Pixel-Wise Explanations for Non-Linear Classifier Decisions by Layer-Wise Relevance Propagation , 2015, PloS one.

[4]  C. Cooper,et al.  Multidisciplinary consensus on the classification of prenatal and postnatal urinary tract dilation (UTD classification system). , 2014, Journal of pediatric urology.

[5]  R. González,et al.  [The prenatal diagnosis of hydronephrosis, when and why to operate?]. , 1998, Archivos espanoles de urologia.

[6]  M. Woodward,et al.  Postnatal management of antenatal hydronephrosis , 2002, BJU international.

[7]  Patrice Y. Simard,et al.  Best practices for convolutional neural networks applied to visual document analysis , 2003, Seventh International Conference on Document Analysis and Recognition, 2003. Proceedings..

[8]  I. Gaboury,et al.  Reliability assessment of Society for Fetal Urology ultrasound grading system for hydronephrosis. , 2008, The Journal of urology.

[9]  Kunio Doi,et al.  Computer-aided diagnosis in medical imaging: Historical review, current status and future potential , 2007, Comput. Medical Imaging Graph..

[10]  Armando J Lorenzo,et al.  Predictive Analytics and Modeling Employing Machine Learning Technology: The Next Step in Data Sharing, Analysis, and Individualized Counseling Explored With a Large, Prospective Prenatal Hydronephrosis Database. , 2019, Urology.

[11]  Armando J Lorenzo,et al.  Six of one, half a dozen of the other: A measure of multidisciplinary inter/intra-rater reliability of the society for fetal urology and urinary tract dilation grading systems for hydronephrosis. , 2017, Journal of pediatric urology.

[12]  Yrjö Neuvo,et al.  A New Class of Detail-Preserving Filters for Image Processing , 1987, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[13]  Martín Abadi,et al.  TensorFlow: Large-Scale Machine Learning on Heterogeneous Distributed Systems , 2016, ArXiv.

[14]  Geoffrey E. Hinton,et al.  Deep Learning , 2015, Nature.

[15]  Geoffrey E. Hinton,et al.  ImageNet classification with deep convolutional neural networks , 2012, Commun. ACM.

[16]  Kjell Tullus,et al.  Febrile urinary tract infections in children. , 2011, The New England journal of medicine.

[17]  Suzanna Becker,et al.  Grading Prenatal Hydronephrosis from Ultrasound Imaging Using Deep Convolutional Neural Networks , 2018, 2018 15th Conference on Computer and Robot Vision (CRV).

[18]  Ranil R. Sonnadara,et al.  Unsupervised Medical Image Segmentation with Adversarial Networks: From Edge Diagrams to Segmentation Maps , 2019, ArXiv.

[19]  Richard S. Lee,et al.  The Society for Fetal Urology consensus statement on the evaluation and management of antenatal hydronephrosis. , 2010, Journal of pediatric urology.

[20]  S. Furth,et al.  Computer-aided diagnosis of congenital abnormalities of the kidney and urinary tract in children based on ultrasound imaging data by integrating texture image features and deep transfer learning image features. , 2019, Journal of pediatric urology.

[21]  Armando J Lorenzo,et al.  Associations of Initial Society for Fetal Urology Grades and Urinary Tract Dilatation Risk Groups with Clinical Outcomes in Patients with Isolated Prenatal Hydronephrosis , 2017, The Journal of urology.

[22]  Yi Yang,et al.  Long-term follow-up and management of prenatally detected, isolated hydronephrosis. , 2010, Journal of pediatric surgery.

[23]  Cengiz Öztireli,et al.  Towards better understanding of gradient-based attribution methods for Deep Neural Networks , 2017, ICLR.

[24]  Mohit Bhandari,et al.  What’s holding up the big data revolution in healthcare? , 2018, British Medical Journal.

[25]  M. Hanna Antenatal hydronephrosis and ureteropelvic junction obstruction: the case for early intervention. , 2000, Urology.

[26]  Marius George Linguraru,et al.  Quantitative Ultrasound for Measuring Obstructive Severity in Children with Hydronephrosis. , 2016, The Journal of urology.