H. Wolfson

Yehezkel Lamdan, Haim J. Wolfson, Jacob T. Schwartz, 2011, Proceedings CVPR '88: The Computer Society Conference on Computer Vision and Pattern Recognition.

Symmetry: a context free Cue for Foveated Vision

D. Reisfeld, H. Wolfson, Y. Yeshurun, 1992 .

MolAxis: Efficient and accurate identification of channels in macromolecules

H. Wolfson, R. Nussinov, D. Halperin, 2008, Proteins.

Small molecule recognition: solid angles surface representation and molecular shape complementarity.

H. Wolfson, R. Nussinov, R. Norel, 1999, Combinatorial chemistry & high throughput screening.

Articulated object recognition, or: how to generalize the generalized Hough transform

Haim J. Wolfson, Avinoam Beinglass, H. Wolfson, 1991, Proceedings. 1991 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.

Context-free attentional operators: The generalized symmetry transform

Yehezkel Yeshurun, Haim J. Wolfson, Daniel Reisfeld, 1995, International Journal of Computer Vision.

Protein functional epitopes: hot spots, dynamics and combinatorial libraries.

H. Wolfson, R. Nussinov, B. Ma, 2001, Current opinion in structural biology.

On recognition of 3-D objects from 2-D images

Yehezkel Lamdan, Haim J. Wolfson, Jacob T. Schwartz, 2011, Proceedings. 1988 IEEE International Conference on Robotics and Automation.

On the error analysis of 'geometric hashing'

Yehezkel Lamdan, Haim J. Wolfson, H. Wolfson, 1991, Proceedings. 1991 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.

An improved model-based matching method using footprints

Haim J. Wolfson, Jiawei Hong, H. Wolfson, 1988, [1988 Proceedings] 9th International Conference on Pattern Recognition.

A new, structurally nonredundant, diverse data set of protein–protein interfaces and its implications

H. Wolfson, R. Nussinov, Chung-Jung Tsai, 2004, Protein science : a publication of the Protein Society.

3-D curve matching using splines

Trevor J. Hastie, Haim J. Wolfson, Eyal Kishon, 1990, J. Field Robotics.

H. Wolfson, R. Nussinov, Inbal Halperin, 2006, Proteins.

Analysis and classification of RNA tertiary structures.

H. Wolfson, R. Nussinov, O. Dror, 2008, RNA.

Allosteric Regulation of Glycogen Synthase Kinase 3β: A Theoretical Study†

Nir London, Ruth Nussinov, Haim J. Wolfson, 2010, Biochemistry.

A dataset of protein-protein interfaces generated with a sequence-order-independent comparison technique.

H. Wolfson, R. Nussinov, Chung-Jung Tsai, 1996, Journal of molecular biology.

Multiple diverse ligands binding at a single protein site : A matter of pre-existing populations

H. Wolfson, R. Nussinov, M. Shatsky, 2001 .

FiberDock: Flexible induced‐fit backbone refinement in molecular docking

H. Wolfson, R. Nussinov, E. Mashiach, 2010, Proteins.

Protein-protein interfaces: architectures and interactions in protein-protein interfaces and in protein cores. Their similarities and differences.

H. Wolfson, R. Nussinov, C. J. Tsai, 1996, Critical reviews in biochemistry and molecular biology.

Generation and analysis of a protein–protein interface data set with similar chemical and spatial patterns of interactions

Ruth Nussinov, Alexandra Shulman-Peleg, Shira Mintz, 2005, Proteins.

Spatial chemical conservation of hot spot interactions in protein-protein complexes

H. Wolfson, R. Nussinov, M. Shatsky, 2007, BMC Biology.

Protein-protein interactions; coupling of structurally conserved residues and of hot spots across interfaces. Implications for docking.

H. Wolfson, R. Nussinov, Inbal Halperin, 2004, Structure.

Examination of shape complementarity in docking of Unbound proteins

H. Wolfson, R. Nussinov, R. Norel, 1999, Proteins.

SiteLight: Binding‐site prediction using phage display libraries

Ruth Nussinov, Inbal Halperin, Haim Wolfson, 2003, Protein science : a publication of the Protein Society.

Studies of protein‐protein interfaces: A statistical analysis of the hydrophobic effect

H. Wolfson, R. Nussinov, Chung-Jung Tsai, 1997, Protein science : a publication of the Protein Society.

Techniques for searching for structural similarities between protein cores, protein surfaces and between protein-protein interfaces

Ruth Nussinov, Haim J. Wolfson, Chung-Jung Tsai, 1996 .

Conformational transitions in human translin enable nucleic acid binding

H. Wolfson, L. Perez-Cano, J. Fernández-Recio, 2013, Nucleic acids research.

Protein structure fitting and refinement guided by cryo-EM density.

Ben M. Webb, H. Wolfson, W. Chiu, 2008, Structure.

Modeling of Multimolecular Complexes.

H. Wolfson, D. Schneidman-Duhovny, 2020, Methods in molecular biology.

EMatch: an efficient method for aligning atomic resolution subunits into intermediate-resolution cryo-EM maps of large macromolecular assemblies

H. Wolfson, R. Nussinov, O. Dror, 2006, Acta crystallographica. Section D, Biological crystallography.

Flexible docking allowing induced fit in proteins: Insights from an open to closed conformational isomers

R Nussinov, H J Wolfson, H. Wolfson, 1998, Proteins.

ScanNet: An interpretable geometric deep learning model for structure-based protein binding site prediction

H. Wolfson, J. Tubiana, D. Schneidman-Duhovny, 2021, bioRxiv.

MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions

Ruth Nussinov, Haim J. Wolfson, Maxim Shatsky, 2008, Nucleic Acids Res..

Constructing templates for protein structure prediction by simulation of protein folding pathways

H. Wolfson, R. Nussinov, Ilona Kifer, 2008, Proteins.

Blind prediction of interfacial water positions in CAPRI

Kengo Kinoshita, Haruki Nakamura, Xiaoqin Zou, 2014, Proteins.

Mechanism of Two Classes of Cancer Mutations in the Phosphoinositide 3-Kinase Catalytic Subunit

Yuval Inbar, Haim J. Wolfson, Dina Schneidman-Duhovny, 2007, Science.

Probabilistic Relaxation Labeling: A Short Survey on Object Recognition

S. Nayar, H. Wolfson, 2019 .

ParaDock: a flexible non-specific DNA—rigid protein docking algorithm

Haim J. Wolfson, H. Wolfson, Itamar Banitt, 2011, Nucleic acids research.

Graph Matching by “ Geodesic Hashing ” for the Alignment of Pseudoknoted RNA Secondary Structures

H. Wolfson, M. Abraham, Mira Abraham, 2019 .

Multiple Docking for Protein Structure Prediction

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2005, Int. J. Robotics Res..

Nussinov Multiple Docking for Protein Structure Prediction

H. Wolfson, Y. Inbar, Ruth, 2004 .

Principles of nanostructure design with protein building blocks

Ruth Nussinov, Nurit Haspel, Carlos Alemán, 2007, Proteins.

Beta2-microglobulin amyloidosis: insights from conservation analysis and fibril modelling by protein docking techniques.

H. Wolfson, R. Nussinov, H. Benyamini, 2003, Journal of molecular biology.

Structure‐based in silico identification of ubiquitin‐binding domains provides insights into the ALIX‐V:ubiquitin complex and retrovirus budding

H. Wolfson, Shay Artzi, E. Freed, 2013, The EMBO journal.

Solving Jigsaw Puzzles Using a Robot

Grigore C. Burdea, Haim J. Wolfson, H. Wolfson, 2020 .

Design of Disruptors of the Hsp90–Cdc37 Interface

H. Wolfson, G. Colombo, N. Zaffaroni, 2020, Molecules.

Identification of the N-terminal Peptide Binding Site of Glucose-regulated Protein 94*

H. Wolfson, S. Radford, D. Schneidman-Duhovny, 2004, Journal of Biological Chemistry.

Conservation and amyloid formation: A study of the gelsolin‐like family

H. Wolfson, R. Nussinov, H. Benyamini, 2003, Proteins.

fragment folding and assembly Reducing the computational complexity of protein folding via

H. Wolfson, R. Nussinov, N. Haspel, 2002 .

Principles of flexible protein–protein docking

H. Wolfson, R. Nussinov, E. Mashiach, 2008, Proteins.

Protein‐Protein Interaction Modeling and Inhibition: The TAU Bioinfo3D Perspective

H. Wolfson, 2013 .

Metabolic stereoselectivity of cytochrome P450 3A4 towards deoxypodophyllotoxin: In silico predictions and experimental validation.

H. Wolfson, Mattijs K. Julsing, H. J. Woerdenbag, 2008, European journal of medicinal chemistry.

Diameter-selective dispersion of carbon nanotubes by β-lactoglobulin whey protein.

H. Wolfson, Efrat Mashiach-Farkash, O. Regev, 2013, Colloids and surfaces. B, Biointerfaces.

Novel LIMK2 Inhibitor Blocks Panc-1 Tumor Growth in a mouse xenograft model

H. Wolfson, Y. Kloog, S. Carmeli, 2014, Oncoscience.

Reduced B cell antigenicity of Omicron lowers host serologic response

H. Wolfson, J. Tubiana, D. Schneidman-Duhovny, 2022, Cell Reports.

Theoretical Characterization of Substrate Access/Exit Channels in the Human Cytochrome P450 3A4 Enzyme: Involvement of Phenylalanine Residues in the Gating Mechanism

Ruth Nussinov, Sason Shaik, Haim J. Wolfson, 2009, The journal of physical chemistry. B.

ScanNet: A Web Server for Structure-based Prediction of Protein Binding Sites with Geometric Deep Learning.

H. Wolfson, J. Tubiana, D. Schneidman-Duhovny, 2022, Journal of molecular biology.

PharmaGist: a webserver for ligand-based pharmacophore detection

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2008, Nucleic Acids Res..

PatchDock and SymmDock: servers for rigid and symmetric docking

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2005, Nucleic Acids Res..

De novo tubular nanostructure design based on self-assembly of beta-helical protein motifs.

Ruth Nussinov, Nurit Haspel, Carlos Alemán, 2006, Structure.

Efficient Unbound Docking of Rigid Molecules

Ruth Nussinov, Haim J. Wolfson, Dina Schneidman-Duhovny, 2002, WABI.

Bioconversion of deoxypodophyllotoxin into epipodophyllotoxin in E. coli using human cytochrome P450 3A4

H. Wolfson, Mattijs K. Julsing, H. J. Woerdenbag, 2008 .

FireDock: Fast interaction refinement in molecular docking

Ruth Nussinov, Nelly Andrusier, Haim J Wolfson, 2007, Proteins.

Folding funnels and conformational transitions via hinge-bending motions

Ruth Nussinov, Chung-Jung Tsai, Buyong Ma, 2007, Cell Biochemistry and Biophysics.

FireDock: a web server for fast interaction refinement in molecular docking†

Ruth Nussinov, Haim J. Wolfson, Nelly Andrusier, 2008, Nucleic Acids Res..

An integrated suite of fast docking algorithms

Ruth Nussinov, Dina Schneidman-Duhovny, Yoli Shavit, 2010, Proteins.

Geometric hashing: an overview

Haim J. Wolfson, Isidore Rigoutsos, H. Wolfson, 1997 .

Computer-Based Identification of a Novel LIMK1/2 Inhibitor that Synergizes with Salirasib to Destabilize the Actin Cytoskeleton

H. Wolfson, Efrat Mashiach-Farkash, Y. Kloog, 2012, Oncotarget.

A method for simultaneous alignment of multiple protein structures

Ruth Nussinov, Maxim Shatsky, Haim J Wolfson, 2004, Proteins.

MASS: multiple structural alignment by secondary structures

Ruth Nussinov, Haim J. Wolfson, Hadar Benyamini, 2003, ISMB.

HingeProt: Automated prediction of hinges in protein structures

Ruth Nussinov, Dina Schneidman-Duhovny, Turkan Haliloglu, 2008, Proteins.

Automatic prediction of protein interactions with large scale motion

Ruth Nussinov, Haim J Wolfson, Dina Schneidman-Duhovny, 2007, Proteins.

QM/MM study of the active species of the human cytochrome P450 3A4, and the influence thereof of the multiple substrate binding.

Ruth Nussinov, Sason Shaik, Dan Fishelovitch, 2007, The journal of physical chemistry. B.

Predicting molecular interactions in silico: II. Protein-protein and protein-drug docking.

Ruth Nussinov, Dina Schneidman-Duhovny, Haim J Wolfson, 2003, Current medicinal chemistry.

Acetylcholine receptor metabolism in a nonfusing muscle cell line.

H. Wolfson, J. Patrick, J. McMillan, 1977, The Journal of biological chemistry.

Studies of protein‐protein interfaces: A statistical analysis of the hydrophobic effect

H. Wolfson, R. Nussinov, Chung-Jung Tsai, 1997, Protein science : a publication of the Protein Society.

ScanNet: an interpretable geometric deep learning model for structure-based protein binding site prediction

H. Wolfson, J. Tubiana, D. Schneidman-Duhovny, 2021, Nature Methods.

SiteEngines: recognition and comparison of binding sites and protein–protein interfaces

Ruth Nussinov, Haim J. Wolfson, Alexandra Shulman-Peleg, 2005, Nucleic Acids Res..

Inferential optimization for simultaneous fitting of multiple components into a CryoEM map of their assembly.

Andrej Sali, Haim J Wolfson, Maya Topf, 2009, Journal of molecular biology.

ScanNet: an interpretable geometric deep learning model for structure-based protein binding site prediction

H. Wolfson, J. Tubiana, D. Schneidman-Duhovny, 2022, Nature Methods.

Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies

Ruth Nussinov, Yuval Inbar, Hadar Benyamini, 2005, Physical biology.

Predicting molecular interactions in silico: I. A guide to pharmacophore identification and its applications to drug design.

Ruth Nussinov, Alexandra Shulman-Peleg, Haim J Wolfson, 2004, Current medicinal chemistry.

An automated computer vision and robotics-based technique for 3-D flexible biomolecular docking and matching

Ruth Nussinov, Bilha Sandak, Haim J. Wolfson, 1995, Comput. Appl. Biosci..

Potential folding–function interrelationship in proteins

H. Wolfson, R. Nussinov, Sandeep Kumar, 2004, Proteins.

How Does the Reductase Help To Regulate the Catalytic Cycle of Cytochrome P450 3A4 Using the Conserved Water Channel?

Ruth Nussinov, Sason Shaik, Haim J. Wolfson, 2010, The journal of physical chemistry. B.

Reduced antigenicity of Omicron lowers host serologic response

H. Wolfson, J. Tubiana, D. Schneidman-Duhovny, 2022, bioRxiv.

SegmA: Residue Segmentation of cryo-EM density maps

H. Wolfson, Mark Rozanov, 2021, bioRxiv.

DockStar: a novel ILP-based integrative method for structural modeling of multimolecular protein complexes

Haim J. Wolfson, Dan Cohen, Naama Amir, 2015, Bioinform..

Amino acid pair interchanges at spatially conserved locations.

H. Wolfson, R. Nussinov, D. Fischer, 1996, Journal of molecular biology.

AAnchor: CNN guided detection of anchor amino acids in high resolution cryo-EM density maps

Haim J. Wolfson, Mark Rozanov, H. Wolfson, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Fibril modelling by sequence and structure conservation analysis combined with protein docking techniques: beta(2)-microglobulin amyloidosis.

H. Wolfson, R. Nussinov, H. Benyamini, 2005, Biochimica et biophysica acta.

Funneling modulatory peptide design with generative models: Discovery and characterization of disruptors of calcineurin protein-protein interactions

H. Wolfson, J. Tubiana, Inbal Sher, 2023, PLoS Comput. Biol..

FlexProt: Alignment of Flexible Protein Structures Without a Predefinition of Hinge Regions

Ruth Nussinov, Haim J. Wolfson, Maxim Shatsky, 2004, J. Comput. Biol..

Protein structure prediction via combinatorial assembly of sub-structural units

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2003, ISMB.

Reducing the computational complexity of protein folding via fragment folding and assembly

H. Wolfson, R. Nussinov, Chung-Jung Tsai, 2003, Protein science : a publication of the Protein Society.

Hierarchical protein folding pathways: A computational study of protein fragments

Ruth Nussinov, Nurit Haspel, Haim Wolfson, 2003, Proteins.

Memdock: an α-helical membrane protein docking algorithm

Haim J. Wolfson, Dina Schneidman-Duhovny, Naama Hurwitz, 2016, Bioinform..

Geometry‐based flexible and symmetric protein docking

Ruth Nussinov, Yuval Inbar, Haim J Wolfson, 2005, Proteins.

3-D Substructure Matching in Protein Molecules

Ruth Nussinov, Haim J. Wolfson, Daniel Fischer, 1992, CPM.

A hierarchical, building-block-based computational scheme for protein structure prediction

Sandeep Kumar, Ruth Nussinov, Haim J. Wolfson, 2001, IBM J. Res. Dev..

Automated multiple structure alignment and detection of a common substructural motif

R Nussinov, H J Wolfson, Zipora Y. Fligelman, 2001, Proteins.

Multiple Structural Alignment and Core Detection by Geometric Hashing

Ruth Nussinov, Haim J. Wolfson, Nathaniel Leibowitz, 1999, ISMB.

FiberDock: a web server for flexible induced-fit backbone refinement in molecular docking

Ruth Nussinov, Haim J. Wolfson, Efrat Mashiach, 2010, Nucleic Acids Res..

SnapDock—template-based docking by Geometric Hashing

Haim J. Wolfson, Michael Estrin, H. Wolfson, 2017, Bioinform..

Symmetry-based self-assembled nanotubes constructed using native protein structures: the key role of flexible linkers.

Ruth Nussinov, Haim J Wolfson, Chung-Jung Tsai, 2011, Protein and peptide letters.

A comparative study of amyloid fibril formation by residues 15-19 of the human calcitonin hormone: a single beta-sheet model with a small hydrophobic core.

Ruth Nussinov, Nurit Haspel, David Zanuy, 2005, Journal of molecular biology.

Side chain interactions determine the amyloid organization: a single layer β-sheet molecular structure of the calcitonin peptide segment 15–19

H. Wolfson, R. Nussinov, B. Ma, 2004, Physical biology.

Solving jigsaw puzzles by a robot

Grigore C. Burdea, Haim J. Wolfson, H. Wolfson, 1989, IEEE Trans. Robotics Autom..

Taking geometry to its edge: Fast unbound rigid (and hinge‐bent) docking

Ruth Nussinov, Yuval Inbar, Nurit Haspel, 2003, Proteins.

Novel Approach for Efficient Pharmacophore-Based Virtual Screening: Method and Applications

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2009, J. Chem. Inf. Model..

Concepts and schemes for the re-engineering of physical protein modules: generating nanodevices via targeted replacements with constrained amino acids

Ruth Nussinov, Nurit Haspel, Jordi Casanovas, 2006, Physical biology.

Geometrical docking algorithms. A practical approach.

R Nussinov, H J Wolfson, H. Wolfson, 2000, Methods in molecular biology.

Molecular surface representations by sparse critical points

D Fischer, R Nussinov, H J Wolfson, 1994, Proteins.

ARTS: alignment of RNA tertiary structures

Ruth Nussinov, Haim J. Wolfson, Oranit Dror, 2005, ECCB/JBI.

Prediction of interacting single-stranded RNA bases by protein-binding patterns.

Ruth Nussinov, Maxim Shatsky, Alexandra Shulman-Peleg, 2008, Journal of molecular biology.

PepCrawler: a fast RRT-based algorithm for high-resolution refinement and binding affinity estimation of peptide inhibitors

Haim J. Wolfson, Elad Donsky, H. Wolfson, 2011, Bioinform..

PepCrawler: A Fast RRT-Like Algorithm for High-Resolution Refinement and Binding-Affinity Estimation of Peptide Inhibitors - (Abstract)

Haim J. Wolfson, Elad Donsky, H. Wolfson, 2011, WABI.

BioInfo3D: a suite of tools for structural bioinformatics

Ruth Nussinov, Haim J. Wolfson, Dina Schneidman-Duhovny, 2004, Nucleic Acids Res..

Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study

Charles W Christoffer, H. Wolfson, O. Schueler‐Furman, 2023, Proteomics.

The Multiple Common Point Set Problem and Its Application to Molecule Binding Pattern Detection

Ruth Nussinov, Haim J. Wolfson, Maxim Shatsky, 2006, J. Comput. Biol..

Changing the charge distribution of beta-helical-based nanostructures can provide the conditions for charge transfer.

H. Wolfson, R. Nussinov, C. Alemán, 2007, Biophysical journal.

Protein–Ligand Interactions: Energetic Contributions and Shape Complementarity

H. Wolfson, R. Nussinov, R. Norel, 2001 .

The ARTS web server for aligning RNA tertiary structures

Ruth Nussinov, Haim J. Wolfson, Oranit Dror, 2006, Nucleic Acids Res..

Interaction of c(60)-fullerene and carboxyfullerene with proteins: docking and binding site alignment.

Alexandra Shulman-Peleg, Hadar Benyamini, Haim J Wolfson, 2006, Bioconjugate chemistry.

Frontiers in Medicinal Chemistry

S. A. Hutchinson, H. Wolfson, R. Nussinov, 2016 .

PinaColada: peptide-inhibitor ant colony ad-hoc design algorithm

Haim J. Wolfson, Daniel Zaidman, H. Wolfson, 2016, Bioinform..

MolAxis: a server for identification of channels in macromolecules

Ruth Nussinov, Dan Halperin, Haim J. Wolfson, 2008, Nucleic Acids Res..

Structural dynamics of the cooperative binding of organic molecules in the human cytochrome P450 3A4.

Ruth Nussinov, Sason Shaik, Dan Fishelovitch, 2007, Journal of the American Chemical Society.

fragment folding and assembly Reducing the computational complexity of protein folding via

Ruth Nussinov, Nurit Haspel, Haim Wolfson, 2002 .

Access the most recent version at doi: 10.1110/ps.21302 References

H. Wolfson, R. Nussinov, B. Ma, 2001 .

EvoRator2: Predicting Site-specific Amino Acid Substitutions Based on Protein Structural Information Using Deep Learning.

H. Wolfson, J. Tubiana, T. Pupko, 2023, Journal of molecular biology.

[Invited Lecture] Structural motifs in the interior and on the surfaces of protein monomers and at protein-protein interfaces

Ruth Nussinov, Raquel Norel, Haim J. Wolfson, 1998, German Conference on Bioinformatics.

Self-assembly of fused homo-oligomers to create nanotubes.

H. Wolfson, R. Nussinov, Chung-Jung Tsai, 2008, Methods in molecular biology.

Deterministic Pharmacophore Detection Via Multiple Flexible Alignment of Drug-Like Molecules

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2007, RECOMB.

Multiple diverse ligands binding at a single protein site: a matter of pre-existing populations.

H. Wolfson, R. Nussinov, B. Ma, 2002, Protein Science.

Protein structure prediction using a docking‐based hierarchical folding scheme

Ruth Nussinov, Ilona Kifer, Haim J Wolfson, 2011, Proteins.

Efficient computational algorithms for docking and for generating and matching a library of functional epitopes I. Rigid and flexible hinge-bending docking algorithms.

R Nussinov, H J Wolfson, H. Wolfson, 1999, Combinatorial chemistry & high throughput screening.

Efficient computational algorithms for docking and for generating and matching a library of functional epitopes II. Computer vision-based techniques for the generation and utilization of functional epitopes.

R Nussinov, H J Wolfson, H. Wolfson, 1999, Combinatorial chemistry & high throughput screening.

Discovery of Protein Substructures in EM Maps

Ruth Nussinov, Haim J. Wolfson, Oranit Dror, 2005, WABI.

Interchanges of spatially neighbouring residues in structurally conserved environments.

R Nussinov, H J Wolfson, H. Wolfson, 1997, Protein engineering.

Algorithms for multiple protein structure alignment and structure-derived multiple sequence alignment.

Ruth Nussinov, Maxim Shatsky, Haim J Wolfson, 2008, Methods in molecular biology.

Protein structure fitting and refinement guided by cryo-EM density.

Ben M. Webb, H. Wolfson, W. Chiu, 2008, Structure.

Memdock: an α-helical membrane protein docking algorithm

H. Wolfson, D. Schneidman-Duhovny, N. Hurwitz, 2016, Bioinform..

Memdock: An α-Helical Membrane Protein Docking Algorithm.

H. Wolfson, N. Hurwitz, 2021, Methods in molecular biology.

Inferential optimization for simultaneous fitting of multiple components into a CryoEM map of their assembly.

H. Wolfson, A. Sali, M. Topf, 2009, Journal of molecular biology.

Structural Emergence with Order Independent Representations

Conor Ryan, R. Muhammad Atif Azad, H. Wolfson, 2003, GECCO.

Deterministic Pharmacophore Detection Via Multiple Flexible Alignment of Drug-Like Molecules

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2007, RECOMB.

Multiple diverse ligands binding at a single protein site: A matter of pre‐existing populations

H. Wolfson, R. Nussinov, B. Ma, 2002, Protein science : a publication of the Protein Society.

Blind prediction of interfacial water positions in CAPRI

Julie C. Mitchell, Jeffrey J. Gray, H. Wolfson, 2014, Proteins.